The program is still under development. Changes may occur
| Monday 10 June 2024 | |
| 9.00 – 9.10 | Welcome by ESCV Executive |
|
Session 1 General aspects |
|
| 9.10-9.30 | Introduction to the subject and the program |
| Tobias Allander and Oskar Karlsson Lindsjö, Karolinska University Hospital and Public Health Agency of Sweden, Stockholm, Sweden | |
| 9.30-10.00 | Multicenter benchmarking of short and long read wet lab protocols for clinical viral metagenomics |
| Jutte de Vries, Leiden University, Leiden, the Netherlands | |
| 10.00-10.30 | COFFEE BREAK |
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Session 2 Rapid metagenomics |
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| 10.30-10.55 | Unified metagenomic method for rapid detection of bacteria, fungi and viruses in clinical samples |
| Adela Medina, Guy's and St. Thomas' NHS Foundation Trust, London, United Kingdom | |
| 10.55-11.20 | Clinical metagenomics using Nanopore sequencing |
| Oscar Torres, University College London, United Kingdom | |
| 11.20-11.45 | Rapid and sensitive single-sample viral metagenomics using Nanopore Flongle sequencing |
| Ian Pichler, University of Zurich, Switzerland | |
| 11.45-12.10 | Submitted abstract presentation |
| 12.10-13.15 | LUNCH |
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Session 3 Application of Next Generation Sequencing in Virology |
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| 13.15-13.40 | Using metagenomic approaches in Wastewater Surveillance |
| Willemijn Lodder, National Instutute for Public Helath and the Environment, Bilthoven, the Netherlands | |
| 13.40-14.05 | Genomic studies of adeno-associated virus hepatitis |
| Sarah Buddle, University College London, United Kingdom | |
| 14.05-14.30 | Enterovirus sequencing: why, when, and how |
| Kim Benschop, National Instutute for Public Helath and the Environment, Bilthoven, the Netherlands | |
| 14.30-14.55 | Submitted abstract presentation |
| 14.55-15.30 | COFFEE BREAK |
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Session 4 Parallell workshops and technology presentation |
|
| Option A: | |
| 15.30 -18.00 | Bioinformatics hands-on workshop |
| Option B: | |
| 15.30-16.30 | Parallell group discussions |
| 1. Medical aspects of diagnostic viral metagenomics | |
| 2. Wetlab tricks, host depletion, pathogen enrichment | |
| 3. NGS and IVDR | |
| 16.30-17.00 | Technical developments within NGS |
| Valtteri Wirta, Karolinska Institutet and Science for Life Laboratories, Stockholm, Sweden | |
| 19.00 | DINNER |
| Tuesday 11 June 2024 | |
| 8.30-8.35 | Opening |
|
Session 5 One health and emerging viruses |
|
| 8.35-9.15 | A Metagenomics Perspective Approach to One Health |
| Edward Holmes, University of Sydney, Australia | |
| 9.15-9.40 | Overview of new human viruses |
| Peter Simmonds, University of Oxford, United Kingdom | |
| 9.40-10.05 | Unveiling the Spillover: NGS and One Health Surveillance for Emerging Viruses |
| Klara Sondén, Publich Health Agency of Sweden | |
| 10.05-10.20 | Submitted abstract presentation |
| 10.20-10.50 | COFFEE BREAK |
|
Session 6 Clinical decision-making based on host responses |
|
| 11.50-11.05 | Immune transcriptomics for diagnostic use, an introduction |
| Niklas Björkström, Karolinska Institutet, Stockholm, Sweden | |
| 11.05-11.30 | Diagnostic value of human trancriptome analysis |
| Christophe Rodriguez, University of Paris-Est-Creteil, Paris, France | |
| 11.30-11.55 | Genetic susceptibility to viral infections: diagnostic and therapeutic challenges |
| Peter Bergman, Karolinska Institutet, Stockholm, Sweden | |
| 11.55-12.30 | Submitted abstract presentations |
| 12:30-13.30 | LUNCH |
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Session 7 Summary |
|
| 13.30-14.30 | Summary of workshop discussions |
| 14.30-14.45 | End of Meeting and farewell |